Skip to content
View lagosproject's full-sized avatar

Block or report lagosproject

Block user

Prevent this user from interacting with your repositories and sending you notifications. Learn more about blocking users.

You must be logged in to block users.

Maximum 250 characters. Please don’t include any personal information such as legal names or email addresses. Markdown is supported. This note will only be visible to you.
Report abuse

Contact GitHub support about this user’s behavior. Learn more about reporting abuse.

Report abuse
lagosproject/README.md

Hi there, I'm Pablo Fernández Lagos 👋

I am a Computer Engineer specialized in Artificial Intelligence, with a strong passion for applying AI and software development to the healthcare sector through bioinformatics. Currently, I am expanding my domain knowledge by studying Bioinformatics and Data Science in Personalized Precision Medicine at the Instituto de Salud Carlos III.

🧬 Featured Bioinformatics Projects

  • PS Analyzer: A modern, comprehensive Sanger sequence analysis and clinical reporting tool designed for clinical and research use. Built with Angular and Tauri, it identifies SNVs and Indels precisely while keeping genetic data secure locally.
  • Bio-Engine: An asynchronous backend Python service/API designed to handle heavy bioinformatics computational tasks. It integrates native tools like Tracy for sequence alignment and VEP for variant annotation.

🤖 AI, Apps & Games

I fuse my passion for technology by creating diverse services, apps, and games.

  • ImageLabelIA: A robust image classifier and object detector tailored for photographers, utilizing Vision Transformer (ViT) and DEtection TRansformer (DETR).
  • Dictation: A versatile note-taking app built with Flutter to write notes and transcribe voice-to-text.
  • Predictive AI Models: Previously implemented predictive AI models for healthcare appointment management using Python, TensorFlow, and Keras.
  • Video & AI Research: Researched and developed neural networks (CNNs) for gaze fixation prediction and perceptual video compression algorithms at the Centro de Tecnología Biomédica (CTB).

🛠 Tech Stack & Tools

  • Bioinformatics Tools: Tracy, VEP, samtools, bgzip.
  • Frontend & Desktop: Angular, Tauri, Flutter.
  • Backend & APIs: Python, FastAPI.
  • AI & Data Science: TensorFlow, Keras, Vision Transformer (ViT), DETR.

Pinned Loading

  1. ImageLabelIA ImageLabelIA Public

    Offline AI image tagger for photographers. Runs ONNX models locally via Tauri (Rust) + Angular — no cloud, no uploads. Writes tags directly to IPTC/XMP metadata.

    CSS 1

  2. ArtistCollabMap ArtistCollabMap Public

    Visualize artist collaborations with Spotify data using Dash.

    Python 3

  3. ps-analyzer ps-analyzer Public

    Comprehensive Sanger sequence analysis and clinical reporting tool. Identifies SNVs and Indels precisely while keeping your genetic data secure locally.

    TypeScript 2

  4. DNAEmbeddings DNAEmbeddings Public

    Interactive UMAP visualization of ALPHAGenome DNA foundation model embeddings across the human genome (hg38). Live demo via GitHub Pages.

    HTML 1 1